Usage
Installation
Data Preparation and Setup
Creating a pipeline
Checking your dataset
Tracking File
Contributing and troubleshooting
Wonambi
Overview
Reading data
Annotations file
Channel Names
Converting between Formats
Signal Quality Control
Signal Quality
Functions to implement S.Q.U.I.D
Calculate QC metrics
Export QC metrics to dataset
Signal Preprocessing
Artefacts
Functions to implement S.A.N.D
Detect Artefacts
Staging
Overview
Functions to automatically score staging
Detect stages
TIDE: Transitions, Intervals, and Dynamics of Epochs
TIDE Outputs
Run TIDE from the pipeline
Examples
TIDE metric details
Lower-level TIDE class
Macro-Architecture
Overview
Extract macro-architecture
Create datasets
Output
Slow Oscillations
Overview
Functions to detect Slow Oscillations
Detect slow oscillations
Export slow oscillations characteristics
Create datasets
Outputs of Slow Oscillations
Spindles
Overview
Functions to detect spindles
Detect spindles
Export spindle characteristics
Create datasets
Outputs of Spindle
Phase Amplitude Coupling
Overview
Run Phase Amplitude Coupling
Event synchrony
Overview
Run Event Synchrony
Export Event Synchrony Dataset
API
seapipe
Index
Index